Skip navigation

CTD Changes

May 9, 2012 (rev 11164)

  1. Re-styled paging navigation, vocabulary-browser navigation, keyword query results, and other interface elements.

May 8, 2012 (rev 11146)

  1. Published new data.
  2. New Gene Set Enricher tool, and links from chemical-diseases and disease-chemicals pages to view enriched GO terms and pathways for gene sets that form the basis of those relationships.
  3. New gene vocabulary browser for selecting gene query terms on advanced query forms.
  4. Improved presentation of complex reference abstracts.
  5. Removed CAPTCHA from contact form for ordinary use cases.

May 3, 2012 (rev 11123)

  1. Fixed performance issues with organism-gene displays.
  2. Updated data model documentation.

April 26, 2012 (rev 11083)

  1. Optimized disease-interactions pages.
  2. Updated FAQ technology page.

April 25, 2012 (rev 11057)

  1. Published new data.
  2. Added reference Batch Query reports.
  3. Updated help and FAQ.
  4. Upgraded jQuery UI lib.

April 17, 2012 (rev 10989)

  1. Improved Batch Query error handling
  2. Improved certain query interfaces.
  3. Updated help and FAQ text, and data model documentation.

March 30, 2012 (rev 10923)

  1. Improved reference and GO displays.
  2. Fixed issue with uploading of certain files to the Batch Query.
  3. Upgraded jQuery and other libs.

March 28, 2012 (rev 10904)

  1. Optimized some reference queries and displays.
  2. Upgraded Cytoscape Web.

March 26, 2012 (rev 10890)

  1. Updated About Us, Funding, and Personnel pages.
  2. Improved advanced query term displays.
  3. Internal optimizations.

March 21, 2012 (rev 10860)

  1. Improved the downloadable chemical and disease vocabulary files:
    • Added term definitions.
    • Removed redundant synonyms.
    • Added term defs and synonyms to disease vocabulary OBO file.
  2. Updated CTD publications list.

March 19, 2012 (rev 10825)

  1. Added ability to restricted searches and tool inputs by official name/symbol (using the "name:" prefix).
  2. Venn tools are now better at asking for clarification in an input term matches more than one data object.
  3. Improved advanced query forms.
  4. Revised help text.

March 13, 2012 (rev 10800)

  1. Fixed issue with certain links in Query History lists.

March 12, 2012 (rev 10795)

  1. Fixed JavaScript issue in selection browsers on query forms.
  2. Updated data model documentation.
  3. Updated error pages.

March 8, 2012 (rev 10783)

  1. Updated Share buttons to work with AddThis API changes.
  2. Revised the tool bar.
  3. Added links to the query history page.
  4. Revised the format of the gene-disease-association field on the gene query form.

March 7, 2012 (rev 10772)

  1. Revised pagination banners.
  2. Revised display and exporting of GO annotation qualifiers.
  3. Internal optimizations.

March 6, 2012 (rev 10753)

  1. Published new data.
  2. Minor revision of XML schema for chemical-gene interactions structured-XML report.

March 1, 2012 (rev 10736)

  1. Revised query-result displays.
  2. Moved the "Other Resources" page to the Help section.

February 27, 2012 (rev 10713)

  1. Revised reference citation displays.
  2. Internal optimizations.

February 23, 2012 (rev 10700)

  1. Added file listings to the Downloads page.
  2. Internal optimizations, styling improvements and text revisions.

February 21, 2012 (rev 10676)

  1. Added raw p-values to output of batch queries and downloadable reports for enriched chemical-GO-term and chemical-pathway associations.
  2. Updated publications list.
  3. Internal optimizations, styling improvements and text revisions.
  4. Data pages now all validate as HTML5!

February 20, 2012 (rev 10666)

  1. Revised secondary sorting of chemical enriched-GO displays.
  2. Replaced "enrichment scores" with corrected p-values in output of batch queries and downloadable reports for enriched chemical-GO-term and chemical-pathway associations.
  3. Internal optimizations, styling improvements, and text revisions.

February 16, 2012 (rev 10651)

  1. Improved operations of accordion and autocomplete widgets.
  2. Upgraded jQuery UI library.
  3. Updated data model documentation.

February 15, 2012 (rev 10639)

  1. Minor homepage and other tweaks.

February 14, 2012 (rev 10625)

  1. Improved data-table pagination and download links.

February 9, 2012 (rev 10615)

  1. Improved formatting of filter and query-term boxes.
  2. Tweaked performance of the main navigation menu.

February 8, 2012 (rev 10606)

  1. Made error handling more transparent for certain detail-page URLs.
  2. Refined basic queries.

February 7, 2012 (rev 10594)

  1. Improved headings on relationship detail pages.
  2. Optimized paginated queries.

February 6, 2012 (rev 10584)

  1. Updated publications and presentations lists. Improved printing. Populated from database.

February 2, 2012 (rev 10551)

  1. Published new data.
  2. Misc internal optimizations and bug fixes.

January 30, 2012 (rev 10520)

  1. Added option to choose the default sorting for advanced interaction queries.
  2. Restructured global navigation.
  3. Improved a downloadable logo.
  4. Revised page footer.
  5. Updated help text.

January 26, 2012 (rev 10504)

  1. Revised main navigation menu.
  2. Added downloadable CTD logos to the linking instructions page.

January 25, 2012 (rev 10490)

  1. Updated page footer.
  2. Updated help text.

January 24, 2012 (rev 10482)

  1. Optimized Venn tool queries.
  2. Added has-related-disease icons to keyword query results for pathways.
  3. Updated data model documentation.

January 20, 2012 (rev 10467)

  1. Fixed display issue for certain descendants in MeSH vocabularies.

January 19, 2012 (rev 10465)

  1. Changed the default sorting of gene-diseases, chemical-diseases, disease-chemicals and disease-genes views to show curated relationships that can also be inferred prior to those that cannot.
  2. Revised page footer.
  3. Optimized various queries.

January 17, 2012 (rev 10446)

  1. Misc UI improvements, help text updates, internal optimizations and refactorings.
  2. Upgraded Cytoscape Web.

January 13, 2012 (rev 10436)

  1. Optimized disease-related queries.

January 10, 2012 (rev 10427)

  1. Consolidated gene-disease-association report files.

January 9, 2012 (rev 10418)

  1. Published new data.
  2. Added new MyVenn tool.
  3. Improved VennViewer and myGeneVenn tools.
  4. Added sorting by reference counts to gene-diseases, chemical-diseases, disease-chemicals, and disease-genes views.
  5. Updated help text.
  6. Renamed some data report files.
  7. Misc internal optimizations and bug fixes.